dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00952
Location and strand information: 1022508 - 1023842 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: putative arabinose-binding protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00953
Location and strand information: 1023910 - 1024806 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00954
Location and strand information: 1024811 - 1025644 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00955
Location and strand information: 1025811 - 1026206 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00956
Location and strand information: 1026287 - 1027243 (-)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00957
Location and strand information: 1027602 - 1029128 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.2561
Protein molecular weight: 57286.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00958
Location and strand information: 1029218 - 1030462 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00959
Location and strand information: 1030542 - 1030862 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00960
Location and strand information: 1030956 - 1031414 (+)
Family: 3.A.1.1.23
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00961
Location and strand information: 1031469 - 1032383 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00962
Location and strand information: 1032413 - 1033891 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.0652
Protein molecular weight: 55680.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00963
Location and strand information: 1033926 - 1034888 (+)
Family: GH43_26|GH43|CBM42
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.6528
Protein molecular weight: 36503.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00964
Location and strand information: 1035174 - 1036028 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00965
Location and strand information: 1036288 - 1036818 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001507_1|CGC17
Gene ID: MGYG000001507_00966
Location and strand information: 1037427 - 1038104 (-)
Family: 8.A.5.1.6
Protein type: TC
Protein description: L-glyceraldehyde 3-phosphate reductase

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000001507_00957	GH51_e0\|3.2.1.55	arabinan
MGYG000001507_00962	GH51_e14\|3.2.1.55	arabinan
MGYG000001507_00963	GH43_e17\|CBM42_e13\|3.2.1.55\|3.2.1.-	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001507_00952	putative arabinose-binding protein	TC	1022508	1023842	+	3.A.1.1.34
MGYG000001507_00953	L-arabinose transport system permease protein AraP	TC	1023910	1024806	+	3.A.1.1.34
MGYG000001507_00954	L-arabinose transport system permease protein AraQ	TC	1024811	1025644	+	3.A.1.1.34
MGYG000001507_00955	hypothetical protein	null	1025811	1026206	-	No domain
MGYG000001507_00956	hypothetical protein	TF	1026287	1027243	-	HTH_5
MGYG000001507_00957	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	1027602	1029128	+	GH51
MGYG000001507_00958	hypothetical protein	STP	1029218	1030462	+	SBP_bac_1
MGYG000001507_00959	hypothetical protein	null	1030542	1030862	+	No domain
MGYG000001507_00960	Lactose transport system permease protein LacF	TC	1030956	1031414	+	3.A.1.1.23
MGYG000001507_00961	L-arabinose transport system permease protein AraQ	TC	1031469	1032383	+	3.A.1.1.36
MGYG000001507_00962	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	1032413	1033891	+	GH51
MGYG000001507_00963	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	1033926	1034888	+	GH43_26\| GH43\| CBM42
MGYG000001507_00964	HTH-type transcriptional activator RhaR	TF	1035174	1036028	-	HTH_AraC+HTH_AraC
MGYG000001507_00965	hypothetical protein	null	1036288	1036818	-	No domain
MGYG000001507_00966	L-glyceraldehyde 3-phosphate reductase	TC	1037427	1038104	-	8.A.5.1.6
Protein ID	Protein Name	Type	Start	End	Strand	Signature